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Widespread Compensatory Evolution Conserves DNA-Encoded Nucleosome Organization in Yeast. |
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Ephraim Kenigsberg, Amir Bar, Eran Segal, Amos Tanay |
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PLoS Comput Biol. 2010 Dec 23;6(12):e1001039.PMID: 21203484 |
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Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project. |
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Gerstein MB et al. |
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Science 2010, 24 December 2010:24 December 2010:DOI: 10.1126/science.1196914 |
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Contribution of histone sequence preferences to nucleosome organization: proposed definitions and methodology |
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Noam Kaplan, Timothy R Hughes, Jason D Lieb, Jonathan Widom, Eran Segal |
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Genome Biology 2010, 11:140 doi:10.1186/gb-2010-11-11-140 |
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Overlapping codes within protein-coding sequences |
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Shalev Itzkovitz, Eran
Hodis, Eran Segal |
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Genome Res. 2010 Sep 14. [Epub ahead of print] |
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Genome-wide measurement of RNA secondary structure in yeast |
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Michael Kertesz, Yue Wan, Elad Mazor, John L.Rinn, Robert C.Nutter, Howard Y.Chang, Eran Segal |
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Nature Nature 467, 103-107 (02 September 2010) | doi:10.1038/nature09322 |
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| See also: Nature Biotechnology Review, Faculty of 1000 review |
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p53 binds preferentially to genomic region with high DNA-encoded nucleosome occupancy |
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Efrat Lidor Nili, Yair Field, Yaniv Lubling Jonathan Widom, Moshe Oren, Eran Segal |
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Genome Research. 2010 Aug;17: doi-10.1101/gr.103945.109 |
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Nucleosome sequence preferences influence in vivo nucleosome organization |
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Noam Kaplan, Irene Moore, Yvonne Fondufe-Mittendorf, Andrea J Gossett, Desiree Tillo, Yair Field, Timothy R Hughes, Jason D Lieb, Jonathan Widom & Eran Segal |
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Nat Struct Mol Biol. 2010 Aug;17(8):918-20 |
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Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes |
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Miao-Chih Tsai, Ohad Manor, Yue Wan, Nima Mosammaparast, Jordon K. Wang, Fei Lan, Yang Shi, Eran Segal, Howard Y. Chang |
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Science DOI:
10.1126/science.1192002, Published Online July 8, 2010 |
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EGF Decreases the Abundance of MicroRNAs That Restrain Oncogenic Transcription Factors |
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Roi Avraham, Aldema Sas-Chen, Ohad Manor, Israel Steinfeld, Reut Shalgi, Gabi Tarcic, Noa Bossel, Amit Zeisel, Ido Amit, Yaara Zwang, Espen Enerly, Hege G. Russnes, Francesca Biagioni, Marcella Mottolese, Sabrina Strano, Giovanni Blandino, Anne-Lise Børresen-Dale, Yitzhak Pilpel, Zohar Yakhini, Eran Segal, and Yosef Yarden |
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Sci. Signal., 1 June 2010 Vol. 3, Issue 124, p. ra43 |
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| See also: Faculty of 1000 review |
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High Nucleosome Occupancy Is Encoded at Human Regulatory Sequences |
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Desiree Tillo, Noam Kaplan, Irene K. Moore, Yvonne Fondufe-Mittendorf, Andrea J. Gossett, Yair Field, Jason D. Lieb, Jonathan Widom, Eran Segal, Timothy R. Hughes |
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PLoS ONE 5(2): e9129. doi:10.1371/journal.pone.0009129 |
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